Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846800.1_cds_XP_016509788.1_22694
CDS Infomation

[gene=LOC107827210] [db_xref=GeneID:107827210] [protein=beta-amylase 2, chloroplastic-like] [protein_id=XP_016509788.1] [location=complement(join(17001..17231,18857..19075,19184..19444,19538..19702,20492..20686,20781..20984,21086..21154,24009..24191))] [gbkey=CDS]
Sequence

ATGGCTTCCATTTTCTCTTCAAGTAGCTTTCATCTTGGTTTTAAGACCAAAAAAATGGCA
TGCAGCTACAAGATTGATAGTACTTGTGCATCTACTCATCAGTTCCCGCGGTTTTCGCTC
CGCCGCGATGGTCCAATGGACTCCCCACTCAGAATGTTTGCTGCCAACCGAGCTTATTCA
GATGCTGCTGATTCTGCTCCAGAGAATTTAGATGAGAAGACCCCTTACATTCCCATATAT
GTCATGCTACCGTTGGGCATCATAAACATGGAAGGTGAGTTAGTGGATGCCGACAATCTC
TTCAACCAACTAAAAATGTTGAAATCATCCAATGTTGATGGCGTCATGGTCGACTGCTGG
TGGGGGATCGTAGAGAGGCGTGCTCCTAAGGAATACAATTGGAGTGGCTACAAAAAGCTT
TTTGAGATTGTTCGAGATCTTGGTCTTAAACTACAGGTGGTTATGTCCTTCCACGAGTGT
GGAGGCAATGTGGGAGACGATATTCATATTCCGATTCCTCAATGGGTTCAAGAAATTGGT
TACGAGAACCCTGACATATATTTTACGGATAAAGAAGGCCGAAGAAACCATGAGTGCCTT
TCTTGGGGTATTGATGCAGAAATGGTCTTAAATGGGAGAACTCCACTTGAGGTTTACTCT
GATTATATGAGAAGCTTCCGCCTCGAATTCGATGACTTCTTTGCTAGACGAGTTATCTCA
GAAATAGAGATAGGACTTGGTCCATGTGGAGAACTCCGATACCCTTCGTATCCGGCAAAA
TTCGGGTGGGAGTATCCCGGAATTGGGGAATTTCAGTGTTATGACAAGTACTTGATCAAG
AGCCTCCAAAAGGCAGCAGAGGCATGGGGAAATTCAGCTTGGGGTAAAGCACCCGAGAAT
GCAGGTTCTTATAACTCAAAACCACAAGAAACTGGGTTTTTTTGTGATTTTGGAGAGTAC
AATGGATTTTATGGTAGGTTCTTCTTGCACTGGTACTCGCAAATTTTAATCAATCATGGC
GATCGAGTACTTGGCTTGGCAGCTTTGGCATTTAAGGGCACTCCAATAGCAGCAAAGGTA
TCAGGAATTCATTGGTGGTACAACACTAAAAGCCATGCAGCTGAACTAACAGCTGGCTTT
TACAACAGTGGCAATTTTACTGGCTATTCTGCAATTGTGTCAATGTTAAAGAAGCATGGG
GCAGCTTTGAATTTTACATGTCTCGAATTGCGCACGGTTGATCAGGAACGGGAATTTCCA
GAAGCATTATCTGACCCGGAAGGATTAGTTTGGGAGGTGCTAAATGCTGCATGGGAAGTC
AAGATACCAGTTGCGGGTGAGAATGCACTGCCGTGTTACCATAGGGAAGGTTACAACAAG
ATTTTGCAAATTGCCAAGCCTATGAATGATCCATTTGGCAGACACTACTTATCTGCCTTT
ACCTACCTCAGGCTTAGCCCAACTCTACTGGAGAAACACAACTTCATAGAGTTTGAAAGA
TTTGTACAAAAGATGCATGATAAGTAG

Peptide Sequence

PEP ID

XP_016509788.1
PEP Infomation

PREDICTED: beta-amylase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MASIFSSSSFHLGFKTKKMACSYKIDSTCASTHQFPRFSLRRDGPMDSPLRMFAANRAYS
DAADSAPENLDEKTPYIPIYVMLPLGIINMEGELVDADNLFNQLKMLKSSNVDGVMVDCW
WGIVERRAPKEYNWSGYKKLFEIVRDLGLKLQVVMSFHECGGNVGDDIHIPIPQWVQEIG
YENPDIYFTDKEGRRNHECLSWGIDAEMVLNGRTPLEVYSDYMRSFRLEFDDFFARRVIS
EIEIGLGPCGELRYPSYPAKFGWEYPGIGEFQCYDKYLIKSLQKAAEAWGNSAWGKAPEN
AGSYNSKPQETGFFCDFGEYNGFYGRFFLHWYSQILINHGDRVLGLAALAFKGTPIAAKV
SGIHWWYNTKSHAAELTAGFYNSGNFTGYSAIVSMLKKHGAALNFTCLELRTVDQEREFP
EALSDPEGLVWEVLNAAWEVKIPVAGENALPCYHREGYNKILQIAKPMNDPFGRHYLSAF
TYLRLSPTLLEKHNFIEFERFVQKMHDK

Transcript Sequence

Gene sequence data has not been registered.